Schinkia azotoformans LMG 9581

Kingdom

Bacillati

Phylum

Bacillota

Class

Bacilli

Order

Caryophanales

Family

Bacillaceae

Genus

Schinkia

Description

Schinkia azotoformans LMG 9581 is a notable bacterium characterized by a single replicon, indicating its genomic structure is likely streamlined compared to organisms with multiple replicons. The accession number for this strain is AJLR00000000.1, which serves as a unique identifier in genomic databases, facilitating research and reference for scientists studying this organism. This bacterium belongs to a group of microorganisms that are significant in various ecological contexts, particularly in nitrogen cycling. While specific metabolic pathways and ecological roles of Schinkia azotoformans are not detailed, its classification suggests potential involvement in processes such as nitrogen fixation or ammonification, which are critical for maintaining soil fertility and supporting plant growth. The presence of Schinkia azotoformans in different environments could imply its role in biogeochemical cycles, particularly in nitrogen transformations. Understanding the characteristics of this bacterium, including its genomic structure and ecological implications, is essential for further studies in microbiology and environmental science. As researchers explore the functional capabilities of Schinkia azotoformans, it may reveal valuable insights into microbial diversity and ecosystem functioning.

Taxonomy

KingdomBacillati
PhylumBacillota
ClassBacilli
OrderCaryophanales
FamilyBacillaceae
GenusSchinkia
SpeciesSchinkia azotoformans
StrainLMG 9581

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Schinkia azotoformans LMG 9581
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Schinkia azotoformans LMG 9581


Gene Summary

Adenine Count

1337734 bp

Thymine Count

1312854 bp

Guanine Count

802735 bp

Cytosine Count

769924 bp

Genome Length

4223247 bp

Protein-coding Genes

4141 genes

Non-Coding Genes

115 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
trar/dksa family transcriptional regulatorBAZO_21088Not AvailableNegative4164610 - 416536228061.9
1,4-dihydroxy-2-naphthoate octaprenyltransferaseBAZO_21093Not AvailableNegative4165467 - 416640234017.6
isochorismate synthaseBAZO_21098Not AvailablePositive4166818 - 416822152181.1
2-succinyl-5-enolpyruvyl-6-hydroxy-3- cyclohexene-1-carboxylate synthaseBAZO_21103Not AvailablePositive4168221 - 417001166030.5
2-succinyl-6-hydroxy-2, 4-cyclohexadiene-1-carboxylate synthaseBAZO_21108Not AvailablePositive4170001 - 417082831809.4
dihydroxynaphthoic acid synthetaseBAZO_21113Not AvailablePositive4170828 - 417165230135.1
o-succinylbenzoic acid--coa ligaseBAZO_21118Not AvailablePositive4171768 - 417324054574.9
trap dicarboxylate transporter subunit dctmBAZO_21123Not AvailableNegative4173422 - 417484050244.9
c4-dicarboxylate transport system, permease small subunitBAZO_21128Not AvailableNegative4174842 - 417535418796.6
hypothetical proteinBAZO_21133Not AvailablePositive4175757 - 417655729817.9

Displaying genes 4201 – 4210 of 4256 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.