Aggregatibacter actinomycetemcomitans RhAA1

Gram-negativeRodNon-motileFacultative anaerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pasteurellales

Family

Pasteurellaceae

Genus

Aggregatibacter

Description

Aggregatibacter actinomycetemcomitans RhAA1 is a Gram-negative bacterium characterized as a chemoheterotroph, utilizing organic compounds for energy. This organism is classified as a facultative anaerobe, indicating its capacity to survive in both aerobic and anaerobic environments. The bacterium exhibits a rod shape and lacks mobility, despite the presence of flagella. A. actinomycetemcomitans RhAA1 thrives optimally at a temperature of 37°C and is categorized as mesophilic, indicating its preference for moderate temperature ranges. The strain possesses a single replicon, which is typical for many bacteria, and is nonsporulating, suggesting that it does not form spores under environmental stress. The habitat of A. actinomycetemcomitans RhAA1 is the host gut, highlighting its role in the gastrointestinal ecosystem. The presence of such bacteria in the gut microbiome can have significant implications for host health, including potential interactions with the immune system and contributions to metabolic processes. Understanding the ecological role of A. actinomycetemcomitans RhAA1 can provide insights into the complex dynamics of gut microbiota and its influence on overall health and disease states. Accessions for this strain can be found under AHGR00000000.1, which may facilitate further research and exploration of its biological characteristics and implications in microbiology.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPasteurellales
FamilyPasteurellaceae
GenusAggregatibacter
SpeciesAggregatibacter actinomycetemcomitans
StrainRhAA1

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityNo
Flagellar presenceYes
Number of membranesNot Available
Image of Aggregatibacter actinomycetemcomitans RhAA1
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsFacultative anaerobe
Optimal temperature37
Temperature rangeMesophilic
HabitatHost gut
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNonsporulating
Energy sourceChemoheterotroph
PathogenicityNot Available

Genome Summary

Aggregatibacter actinomycetemcomitans RhAA1


Gene Summary

Adenine Count

615110 bp

Thymine Count

620353 bp

Guanine Count

504743 bp

Cytosine Count

492841 bp

Genome Length

2233070 bp

Protein-coding Genes

2027 genes

Non-Coding Genes

175 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
Deoxycytidylate deaminaseRHAA1_04226Not AvailablePositive870125 - 87065219243.2
AttrNot AvailableNot AvailablePositive879269 - 879286Not Available
Hypothetical proteinRHAA1_05108Not AvailableNegative1046989 - 10472048263.68
Deoxyribonucleoside 5'-monophosphate phosphataseRHAA1_05113Not AvailableNegative1047207 - 104778221717.3
AttlNot AvailableNot AvailablePositive1047739 - 1047750Not Available
Hypothetical proteinRHAA1_05118Not AvailableNegative1047786 - 104834621958.7
hypothetical proteinRHAA1_05123Not AvailableNegative1048355 - 104873214407.0
hypothetical proteinRHAA1_05128Not AvailableNegative1048776 - 104914714424.7
hypothetical proteinRHAA1_05133Not AvailableNegative1049149 - 10493136036.23
hypothetical proteinRHAA1_05138Not AvailableNegative1049323 - 10495147347.49

Displaying genes 21 – 30 of 2202 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

14 records
Metabolite IDMetabolite nameStructureCAS number
BASm0000277keto-L-sorboseC6H12O6Chemical structure of keto-L-sorboseNot available
Average180.1559Da
Monoisotopic180.0633881Da
BASm0000387(6R)-5,10-methylene-5,6,7,8-tetrahydrofolateC20H21N7O6Chemical structure of (6R)-5,10-methylene-5,6,7,8-tetrahydrofolateNot available
Average455.432Da
Monoisotopic455.1564286Da
BASm0002759dTDP-beta-L-rhamnoseC16H24N2O15P2Not availableNot available
Average546.316Da
Monoisotopic546.066289237Da
BASm0002812aldehydo-D-glucose 6-phosphateC6H13O9PChemical structure of aldehydo-D-glucose 6-phosphateNot available
Average260.1358Da
Monoisotopic260.0297185Da
BASm0002846GDP-6-deoxy-alpha-D-taloseC16H23N5O15P2Chemical structure of GDP-6-deoxy-alpha-D-taloseNot available
Average587.329Da
Monoisotopic587.0676862Da
BASm0003091GDP-4-dehydro-alpha-D-rhamnoseC16H21N5O15P2Chemical structure of GDP-4-dehydro-alpha-D-rhamnoseNot available
Average585.313Da
Monoisotopic585.052036152Da
BASm0003389NADP(+)C21H25N7O17P3Chemical structure of NADP(+)Not available
Average740.386Da
Monoisotopic740.053624107Da
BASm0004884dTDP-6-deoxy-beta-L-taloseC16H26N2O15P2Chemical structure of dTDP-6-deoxy-beta-L-taloseNot available
Average548.3296Da
Monoisotopic548.0808412Da
BASm0014039L-Lactic acidC3H6O3Chemical structure of L-Lactic acid79-33-4
Average90.0779Da
Monoisotopic90.031694058Da
BASm0017271NADC21H28N7O14P2Chemical structure of NAD53-84-9
Average664.433Da
Monoisotopic664.116946663Da

Displaying 1–10 of 14 metabolites

Health Effects

No health effects information available for this bacterium.