Scardovia wiggsiae F0424

ovoid

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Bifidobacteriales

Family

Bifidobacteriaceae

Genus

Scardovia

Description

Scardovia wiggsiae F0424 is a Gram-positive, non-motile bacterium characterized by its ovoid shape. Notably, this species has a single replicon, which is indicative of its genetic structure and replication process. Scardovia wiggsiae is also classified as non-spore-forming, suggesting that it does not produce spores as a means of survival under adverse conditions. The taxonomy of Scardovia wiggsiae is supported by the accession number AGZS00000000.1, which provides a reference for its genetic sequence in scientific databases. This bacterium's characteristics position it within a specific niche in microbial ecology, particularly in environments where Gram-positive non-motile organisms thrive. An essential biological insight regarding Scardovia wiggsiae is its potential role in the human oral microbiome. As a member of the diverse microbial community found in the mouth, it may contribute to the overall health of oral environments and influence conditions such as dental caries or periodontal diseases. Understanding the traits of Scardovia wiggsiae, especially its non-motility and non-spore-forming nature, can further inform research into its interactions with other microorganisms and its ecological functions within the oral cavity.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderBifidobacteriales
FamilyBifidobacteriaceae
GenusScardovia
SpeciesScardovia wiggsiae
StrainF0424

Profile

Physiology
Gram staining propertiesGram-positive
Shapeovoid
Mobilitynon-motile
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
Sporulationnon-spore-forming
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Scardovia wiggsiae F0424


Gene Summary

Adenine Count

362562 bp

Thymine Count

367657 bp

Guanine Count

411993 bp

Cytosine Count

409974 bp

Genome Length

1552186 bp

Protein-coding Genes

1243 genes

Non-Coding Genes

56 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
aspartyl/glutamyl-trna(asn/gln) amidotransferase subunit bHMPREF9156_00491Not AvailableNegative594302 - 59580154499.8
glutamyl-trna(gln) amidotransferase subunit aHMPREF9156_00492Not AvailableNegative595826 - 59739455614.0
aspartyl/glutamyl-trna(asn/gln) amidotransferase subunit cHMPREF9156_00493Not AvailableNegative597415 - 59770810654.6
hypothetical proteinHMPREF9156_00494Not AvailableNegative597815 - 59850725960.7
hypothetical proteinHMPREF9156_00495Not AvailableNegative598586 - 59949431002.3
hypothetical proteinHMPREF9156_00496Not AvailableNegative599620 - 60070241056.0
had atpase, p-type, family icHMPREF9156_00497Not AvailablePositive601077 - 60365390435.4
hypothetical proteinHMPREF9156_00498Not AvailablePositive603867 - 60503343314.4
hypothetical proteinHMPREF9156_00499Not AvailableNegative605136 - 60560916994.9
hypothetical proteinHMPREF9156_00500Not AvailableNegative605657 - 6058908963.73

Displaying genes 521 – 530 of 1299 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

371 records
Metabolite IDMetabolite nameStructureCAS number
BASm0000217alpha-ribazoleC14H18N2O4Chemical structure of alpha-ribazoleNot available
Average278.3037Da
Monoisotopic278.126657074Da
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm00002502,5-didehydro-D-gluconateC6H7O7Chemical structure of 2,5-didehydro-D-gluconate53736-12-2
Average191.1156Da
Monoisotopic191.019177578Da
BASm00002512-dehydropantoateC6H9O4Chemical structure of 2-dehydropantoateNot available
Average145.1333Da
Monoisotopic145.050083776Da
BASm00002634-(hydroxymethyl)benzenesulfonateC7H7O4SChemical structure of 4-(hydroxymethyl)benzenesulfonateNot available
Average187.19Da
Monoisotopic187.007053459Da
BASm0000274aldehydo-D-galacturonateC6H9O7Chemical structure of aldehydo-D-galacturonateNot available
Average193.132Da
Monoisotopic193.0353762Da
BASm0000377(S)-malateC4H4O5Chemical structure of (S)-malateNot available
Average132.0716Da
Monoisotopic132.005873238Da
BASm0000387(6R)-5,10-methylene-5,6,7,8-tetrahydrofolateC20H21N7O6Chemical structure of (6R)-5,10-methylene-5,6,7,8-tetrahydrofolateNot available
Average455.432Da
Monoisotopic455.1564286Da
BASm0000401(S)-2-succinylamino-6-oxoheptanedioateC11H12NO8Chemical structure of (S)-2-succinylamino-6-oxoheptanedioateNot available
Average286.218Da
Monoisotopic286.0579371Da
BASm0000403(S)-acetoinC4H8O2Chemical structure of (S)-acetoinNot available
Average88.1051Da
Monoisotopic88.0524295Da

Displaying 1–10 of 371 metabolites

Health Effects

No health effects information available for this bacterium.