Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Bifidobacteriales
Family
Bifidobacteriaceae
Genus
Scardovia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Bifidobacteriales |
| Family | Bifidobacteriaceae |
| Genus | Scardovia |
| Species | Scardovia wiggsiae |
| Strain | F0424 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | ovoid |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
362562 bp
Thymine Count
367657 bp
Guanine Count
411993 bp
Cytosine Count
409974 bp
Genome Length
1552186 bp
Protein-coding Genes
1243 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| udp-n-acetylmuramoyl-tripeptide-d-alanyl-d- alanine ligase | HMPREF9156_00034 | Not Available | Positive | 47067 - 48653 | 55475.6 |
| phospho-n-acetylmuramoyl-pentapeptide- transferase | HMPREF9156_00035 | Not Available | Positive | 48653 - 49783 | 40897.7 |
| udp-n-acetylmuramoylalanine-d-glutamate ligase | HMPREF9156_00036 | Not Available | Positive | 49826 - 51307 | 52565.0 |
| hypothetical protein | HMPREF9156_00037 | Not Available | Positive | 51304 - 52653 | 48299.9 |
| hypothetical protein | HMPREF9156_00038 | Not Available | Positive | 52724 - 53926 | 42044.6 |
| hypothetical protein | HMPREF9156_00039 | Not Available | Positive | 54032 - 55651 | 57887.2 |
| hypothetical protein | HMPREF9156_00040 | Not Available | Positive | 55644 - 56747 | 39579.4 |
| hypothetical protein | HMPREF9156_00041 | Not Available | Positive | 56844 - 56939 | 3216.78 |
| Tmrna,resume consensus sequence (at 90): attaagtgctaaatctaa | Not Available | Not Available | Positive | 56846 - 57242 | Not Available |
| hypothetical protein | HMPREF9156_00042 | Not Available | Negative | 57406 - 58338 | 34175.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
