Parabacteroides merdae CL03T12C32

Gram-negativeRodAnaerobe

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Bacteroidia

Order

Bacteroidales

Family

Tannerellaceae

Genus

Parabacteroides

Description

Parabacteroides merdae CL03T12C32 is a Gram-negative, rod-shaped bacterium characterized as an anaerobe, indicating that it thrives in environments devoid of oxygen. The presence of flagella suggests that this species is motile, allowing it to move through anaerobic environments effectively. The strain has a single replicon, which is typical for many bacterial species and indicates a streamlined genetic structure. Its genetic information is cataloged under the accession number AGZQ00000000.1, providing a reference for further studies and classification within microbial databases. The anaerobic nature of Parabacteroides merdae CL03T12C32 suggests its potential ecological role in gut microbiomes, where it may contribute to the fermentation of complex carbohydrates, aiding in nutrient processing and supporting host health. Understanding such anaerobic bacteria is essential, as they play a crucial role in maintaining the balance of microbial communities and influencing metabolic pathways in their environments.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassBacteroidia
OrderBacteroidales
FamilyTannerellaceae
GenusParabacteroides
SpeciesParabacteroides merdae
StrainCL03T12C32

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Parabacteroides merdae CL03T12C32
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsAnaerobe
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Parabacteroides merdae CL03T12C32


Gene Summary

Adenine Count

1343782 bp

Thymine Count

1348772 bp

Guanine Count

1116269 bp

Cytosine Count

1109222 bp

Genome Length

4918045 bp

Protein-coding Genes

4122 genes

Non-Coding Genes

118 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
hypothetical proteinHMPREF1060_00017Not AvailableNegative22553 - 2350636260.1
hypothetical proteinHMPREF1060_00018Not AvailableNegative23528 - 2405820045.8
Trna-thrNot AvailableNot AvailablePositive24212 - 24288Not Available
amidophosphoribosyltransferaseHMPREF1060_00019Not AvailablePositive24611 - 2601752089.5
16s ribosomal rnaNot AvailableNot AvailablePositive25869 - 27383Not Available
peptidase tHMPREF1060_00020Not AvailablePositive26049 - 2735948214.7
aminomethyltransferaseHMPREF1060_00021Not AvailablePositive27377 - 2846239385.2
23s ribosomal rnaNot AvailableNot AvailablePositive27865 - 30740Not Available
hypothetical proteinHMPREF1060_00022Not AvailablePositive28624 - 2957434839.5
hypothetical proteinHMPREF1060_00023Not AvailableNegative29583 - 3008019216.9

Displaying genes 51 – 60 of 4240 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.