Parabacteroides merdae CL03T12C32

Gram-negativeRodAnaerobe

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Bacteroidia

Order

Bacteroidales

Family

Tannerellaceae

Genus

Parabacteroides

Description

Parabacteroides merdae CL03T12C32 is a Gram-negative, rod-shaped bacterium characterized as an anaerobe, indicating that it thrives in environments devoid of oxygen. The presence of flagella suggests that this species is motile, allowing it to move through anaerobic environments effectively. The strain has a single replicon, which is typical for many bacterial species and indicates a streamlined genetic structure. Its genetic information is cataloged under the accession number AGZQ00000000.1, providing a reference for further studies and classification within microbial databases. The anaerobic nature of Parabacteroides merdae CL03T12C32 suggests its potential ecological role in gut microbiomes, where it may contribute to the fermentation of complex carbohydrates, aiding in nutrient processing and supporting host health. Understanding such anaerobic bacteria is essential, as they play a crucial role in maintaining the balance of microbial communities and influencing metabolic pathways in their environments.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassBacteroidia
OrderBacteroidales
FamilyTannerellaceae
GenusParabacteroides
SpeciesParabacteroides merdae
StrainCL03T12C32

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Parabacteroides merdae CL03T12C32
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsAnaerobe
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Parabacteroides merdae CL03T12C32


Gene Summary

Adenine Count

1343782 bp

Thymine Count

1348772 bp

Guanine Count

1116269 bp

Cytosine Count

1109222 bp

Genome Length

4918045 bp

Protein-coding Genes

4122 genes

Non-Coding Genes

118 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
hypothetical proteinHMPREF1060_00340Not AvailableNegative400440 - 40125231042.6
glycerate kinaseHMPREF1060_00341Not AvailableNegative401265 - 40241040109.9
6-phosphogluconate dehydrogenase, decarboxylatingHMPREF1060_00342Not AvailablePositive402583 - 40407654706.3
glucose-6-phosphate dehydrogenaseHMPREF1060_00343Not AvailablePositive404286 - 40575556135.2
6-phosphogluconolactonaseHMPREF1060_00344Not AvailablePositive405771 - 40647226252.4
hypothetical proteinHMPREF1060_00345Not AvailableNegative406555 - 40746333224.8
hypothetical proteinHMPREF1060_00346Not AvailableNegative407466 - 40890856005.2
glutamine-trna ligaseHMPREF1060_00347Not AvailableNegative408987 - 41072967290.8
protein dedaHMPREF1060_00348Not AvailablePositive410859 - 41151224352.6
metal ion (mn2+/fe2+) transporter (nramp) family metal ion transporterHMPREF1060_00349Not AvailableNegative411513 - 41276645253.9

Displaying genes 391 – 400 of 4240 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.