Parabacteroides merdae CL03T12C32

Gram-negativeRodAnaerobe

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Bacteroidia

Order

Bacteroidales

Family

Tannerellaceae

Genus

Parabacteroides

Description

Parabacteroides merdae CL03T12C32 is a Gram-negative, rod-shaped bacterium characterized as an anaerobe, indicating that it thrives in environments devoid of oxygen. The presence of flagella suggests that this species is motile, allowing it to move through anaerobic environments effectively. The strain has a single replicon, which is typical for many bacterial species and indicates a streamlined genetic structure. Its genetic information is cataloged under the accession number AGZQ00000000.1, providing a reference for further studies and classification within microbial databases. The anaerobic nature of Parabacteroides merdae CL03T12C32 suggests its potential ecological role in gut microbiomes, where it may contribute to the fermentation of complex carbohydrates, aiding in nutrient processing and supporting host health. Understanding such anaerobic bacteria is essential, as they play a crucial role in maintaining the balance of microbial communities and influencing metabolic pathways in their environments.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassBacteroidia
OrderBacteroidales
FamilyTannerellaceae
GenusParabacteroides
SpeciesParabacteroides merdae
StrainCL03T12C32

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Parabacteroides merdae CL03T12C32
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsAnaerobe
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Parabacteroides merdae CL03T12C32


Gene Summary

Adenine Count

1343782 bp

Thymine Count

1348772 bp

Guanine Count

1116269 bp

Cytosine Count

1109222 bp

Genome Length

4918045 bp

Protein-coding Genes

4122 genes

Non-Coding Genes

118 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
rlua family pseudouridine synthaseHMPREF1060_02949Not AvailablePositive3505827 - 350690640921.9
d-alanine-d-alanine ligaseHMPREF1060_02950Not AvailablePositive3506910 - 350788735954.7
hypothetical proteinHMPREF1060_02951Not AvailablePositive3507977 - 350913444887.9
hypothetical proteinHMPREF1060_02952Not AvailableNegative3509243 - 3513211151337.0
nucleoside transporterHMPREF1060_02953Not AvailablePositive3513434 - 351466645344.9
ornithine-oxo-acid transaminaseHMPREF1060_02954Not AvailablePositive3515280 - 351648844501.7
arginaseHMPREF1060_02955Not AvailablePositive3516495 - 351739132888.6
hypothetical proteinHMPREF1060_02956Not AvailableNegative3517498 - 351980187268.2
hypothetical proteinHMPREF1060_02957Not AvailableNegative3519798 - 3524426171101.0
hypothetical proteinHMPREF1060_02958Not AvailablePositive3524601 - 352538929149.5

Displaying genes 3021 – 3030 of 4240 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.