Parabacteroides merdae CL03T12C32

Gram-negativeRodAnaerobe

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Bacteroidia

Order

Bacteroidales

Family

Tannerellaceae

Genus

Parabacteroides

Description

Parabacteroides merdae CL03T12C32 is a Gram-negative, rod-shaped bacterium characterized as an anaerobe, indicating that it thrives in environments devoid of oxygen. The presence of flagella suggests that this species is motile, allowing it to move through anaerobic environments effectively. The strain has a single replicon, which is typical for many bacterial species and indicates a streamlined genetic structure. Its genetic information is cataloged under the accession number AGZQ00000000.1, providing a reference for further studies and classification within microbial databases. The anaerobic nature of Parabacteroides merdae CL03T12C32 suggests its potential ecological role in gut microbiomes, where it may contribute to the fermentation of complex carbohydrates, aiding in nutrient processing and supporting host health. Understanding such anaerobic bacteria is essential, as they play a crucial role in maintaining the balance of microbial communities and influencing metabolic pathways in their environments.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassBacteroidia
OrderBacteroidales
FamilyTannerellaceae
GenusParabacteroides
SpeciesParabacteroides merdae
StrainCL03T12C32

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Parabacteroides merdae CL03T12C32
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsAnaerobe
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Parabacteroides merdae CL03T12C32 cont1.37, whole genome shotgun

Gene Summary

Adenine Count

1343782 bp

Thymine Count

1348772 bp

Guanine Count

1116269 bp

Cytosine Count

1109222 bp

Genome Length

4918045 bp

Protein-coding Genes

4122 genes

Non-Coding Genes

118 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
excisionase family dna binding domain-containing proteinHMPREF1060_02727Not AvailableNegative3233995 - 323455521905.9
chaperone dnakHMPREF1060_02728Not AvailableNegative3234765 - 323668168779.8
susc/raga family tonb-linked outer membrane proteinHMPREF1060_02729Not AvailablePositive3237448 - 3240615119056.0
hypothetical proteinHMPREF1060_02730Not AvailablePositive3240632 - 324251271165.0
hypothetical proteinHMPREF1060_02731Not AvailablePositive3243002 - 324435152562.0
susc/raga family tonb-linked outer membrane proteinHMPREF1060_02732Not AvailablePositive3244947 - 3248102119719.0
hypothetical proteinHMPREF1060_02733Not AvailablePositive3248122 - 325001471740.0
hypothetical proteinHMPREF1060_02734Not AvailableNegative3250073 - 325050416028.0
hypothetical proteinHMPREF1060_02735Not AvailableNegative3250524 - 32506313719.71
hypothetical proteinHMPREF1060_02736Not AvailableNegative3250777 - 325123216349.5

Displaying genes 2791 – 2800 of 4240 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.