Parabacteroides merdae CL03T12C32

Gram-negativeRodAnaerobe

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Bacteroidia

Order

Bacteroidales

Family

Tannerellaceae

Genus

Parabacteroides

Description

Parabacteroides merdae CL03T12C32 is a Gram-negative, rod-shaped bacterium characterized as an anaerobe, indicating that it thrives in environments devoid of oxygen. The presence of flagella suggests that this species is motile, allowing it to move through anaerobic environments effectively. The strain has a single replicon, which is typical for many bacterial species and indicates a streamlined genetic structure. Its genetic information is cataloged under the accession number AGZQ00000000.1, providing a reference for further studies and classification within microbial databases. The anaerobic nature of Parabacteroides merdae CL03T12C32 suggests its potential ecological role in gut microbiomes, where it may contribute to the fermentation of complex carbohydrates, aiding in nutrient processing and supporting host health. Understanding such anaerobic bacteria is essential, as they play a crucial role in maintaining the balance of microbial communities and influencing metabolic pathways in their environments.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassBacteroidia
OrderBacteroidales
FamilyTannerellaceae
GenusParabacteroides
SpeciesParabacteroides merdae
StrainCL03T12C32

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Parabacteroides merdae CL03T12C32
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsAnaerobe
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Parabacteroides merdae CL03T12C32 cont1.37, whole genome shotgun

Gene Summary

Adenine Count

1343782 bp

Thymine Count

1348772 bp

Guanine Count

1116269 bp

Cytosine Count

1109222 bp

Genome Length

4918045 bp

Protein-coding Genes

4122 genes

Non-Coding Genes

118 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
hypothetical proteinHMPREF1060_02550Not AvailableNegative3019092 - 302052255523.2
glutamate dehydrogenaseHMPREF1060_02551Not AvailableNegative3020688 - 302202248849.4
hypothetical proteinHMPREF1060_02552Not AvailableNegative3022196 - 30223786986.84
hypothetical proteinHMPREF1060_02553Not AvailableNegative3022392 - 302278114801.8
protoporphyrinogen oxidaseHMPREF1060_02554Not AvailableNegative3022814 - 302419050436.6
oxygen-independent coproporphyrinogen iii oxidaseHMPREF1060_02555Not AvailableNegative3024195 - 302556252009.1
hypothetical proteinHMPREF1060_02556Not AvailableNegative3025559 - 302676444754.9
hypothetical proteinHMPREF1060_02557Not AvailableNegative3027010 - 302909178989.8
hypothetical proteinHMPREF1060_02558Not AvailableNegative3029095 - 303141987267.9
hypothetical proteinHMPREF1060_02559Not AvailableNegative3031504 - 303208221271.3

Displaying genes 2611 – 2620 of 4240 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.