Parabacteroides merdae CL03T12C32

Gram-negativeRodAnaerobe

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Bacteroidia

Order

Bacteroidales

Family

Tannerellaceae

Genus

Parabacteroides

Description

Parabacteroides merdae CL03T12C32 is a Gram-negative, rod-shaped bacterium characterized as an anaerobe, indicating that it thrives in environments devoid of oxygen. The presence of flagella suggests that this species is motile, allowing it to move through anaerobic environments effectively. The strain has a single replicon, which is typical for many bacterial species and indicates a streamlined genetic structure. Its genetic information is cataloged under the accession number AGZQ00000000.1, providing a reference for further studies and classification within microbial databases. The anaerobic nature of Parabacteroides merdae CL03T12C32 suggests its potential ecological role in gut microbiomes, where it may contribute to the fermentation of complex carbohydrates, aiding in nutrient processing and supporting host health. Understanding such anaerobic bacteria is essential, as they play a crucial role in maintaining the balance of microbial communities and influencing metabolic pathways in their environments.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassBacteroidia
OrderBacteroidales
FamilyTannerellaceae
GenusParabacteroides
SpeciesParabacteroides merdae
StrainCL03T12C32

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Parabacteroides merdae CL03T12C32
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsAnaerobe
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Parabacteroides merdae CL03T12C32 cont1.37, whole genome shotgun

Gene Summary

Adenine Count

1343782 bp

Thymine Count

1348772 bp

Guanine Count

1116269 bp

Cytosine Count

1109222 bp

Genome Length

4918045 bp

Protein-coding Genes

4122 genes

Non-Coding Genes

118 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
altronate oxidoreductaseHMPREF1060_01806Not AvailablePositive2112723 - 211416254315.5
hypothetical proteinHMPREF1060_01807Not AvailablePositive2114162 - 211564954193.7
hypothetical proteinHMPREF1060_01808Not AvailableNegative2115796 - 211748462708.8
hypothetical proteinHMPREF1060_01809Not AvailablePositive2117567 - 211923463900.6
hypothetical proteinHMPREF1060_01810Not AvailableNegative2119477 - 212163982536.0
rna polymerase sigma-54 factorHMPREF1060_01811Not AvailablePositive2121744 - 212330659645.4
hypothetical proteinHMPREF1060_01812Not AvailablePositive2123319 - 212393922912.5
glycine cleavage system h proteinHMPREF1060_01813Not AvailablePositive2123956 - 212433613952.3
phosphoribosylaminoimidazole carboxylase, catalytic subunitHMPREF1060_01814Not AvailablePositive2124333 - 212483917609.0
4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthaseHMPREF1060_01815Not AvailablePositive2124958 - 212679968379.5

Displaying genes 1851 – 1860 of 4240 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.