Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | CL03T12C01 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1578661 bp
Thymine Count
1570423 bp
Guanine Count
1116965 bp
Cytosine Count
1121200 bp
Genome Length
5387249 bp
Protein-coding Genes
4417 genes
Non-Coding Genes
106 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | HMPREF1065_00889 | Not Available | Positive | 1009898 - 1010470 | 21511.9 |
| hypothetical protein | HMPREF1065_00890 | Not Available | Positive | 1010477 - 1011886 | 54587.0 |
| hypothetical protein | HMPREF1065_00891 | Not Available | Positive | 1011919 - 1013463 | 56084.2 |
| hypothetical protein | HMPREF1065_00892 | Not Available | Positive | 1013487 - 1014434 | 35962.5 |
| hypothetical protein | HMPREF1065_00893 | Not Available | Positive | 1014518 - 1015459 | 36561.1 |
| undecaprenyl-phosphate glucose phosphotransferase | HMPREF1065_00894 | Not Available | Positive | 1015906 - 1017309 | 54564.1 |
| hypothetical protein | HMPREF1065_00895 | Not Available | Positive | 1017349 - 1018146 | 29224.7 |
| capsular exopolysaccharide family protein | HMPREF1065_00896 | Not Available | Positive | 1018155 - 1020566 | 90025.1 |
| hypothetical protein | HMPREF1065_00897 | Not Available | Negative | 1020675 - 1021124 | 16917.2 |
| hypothetical protein | HMPREF1065_00898 | Not Available | Negative | 1021121 - 1021222 | 3217.13 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

