Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | CL03T12C01 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1578661 bp
Thymine Count
1570423 bp
Guanine Count
1116965 bp
Cytosine Count
1121200 bp
Genome Length
5387249 bp
Protein-coding Genes
4417 genes
Non-Coding Genes
106 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| atp synthase subunit alpha | HMPREF1065_00575 | Not Available | Negative | 615771 - 617363 | 57716.7 |
| atp synthase subunit delta | HMPREF1065_00576 | Not Available | Negative | 617486 - 618043 | 21019.8 |
| atp synthase subunit b | HMPREF1065_00577 | Not Available | Negative | 618049 - 618549 | 18885.0 |
| atp synthase subunit c | HMPREF1065_00578 | Not Available | Negative | 618560 - 618814 | 8151.6 |
| atp synthase f0, a subunit | HMPREF1065_00579 | Not Available | Negative | 618846 - 619937 | 40489.1 |
| hypothetical protein | HMPREF1065_00580 | Not Available | Negative | 619939 - 620352 | 16366.9 |
| atp synthase f1, epsilon subunit | HMPREF1065_00581 | Not Available | Negative | 620362 - 620616 | 9100.84 |
| atp synthase subunit beta | HMPREF1065_00582 | Not Available | Negative | 620625 - 622160 | 56123.4 |
| hypothetical protein | HMPREF1065_00583 | Not Available | Negative | 622356 - 623903 | 57400.1 |
| hypothetical protein | HMPREF1065_00584 | Not Available | Negative | 624046 - 624960 | 34342.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

