Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | CL03T12C01 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1578661 bp
Thymine Count
1570423 bp
Guanine Count
1116965 bp
Cytosine Count
1121200 bp
Genome Length
5387249 bp
Protein-coding Genes
4417 genes
Non-Coding Genes
106 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pectate lyase | HMPREF1065_03793 | Not Available | Negative | 4604311 - 4605924 | 61360.3 |
| hypothetical protein | HMPREF1065_03794 | Not Available | Positive | 4606113 - 4606604 | 18182.9 |
| hypothetical protein | HMPREF1065_03795 | Not Available | Negative | 4606695 - 4608695 | 74826.4 |
| hypothetical protein | HMPREF1065_03796 | Not Available | Negative | 4608713 - 4611097 | 91764.5 |
| hypothetical protein | HMPREF1065_03797 | Not Available | Negative | 4611111 - 4614479 | 126818.0 |
| hypothetical protein | HMPREF1065_03798 | Not Available | Negative | 4614476 - 4617511 | 114688.0 |
| hypothetical protein | HMPREF1065_03799 | Not Available | Negative | 4617597 - 4619285 | 64201.7 |
| susc/raga family tonb-linked outer membrane protein | HMPREF1065_03800 | Not Available | Negative | 4619304 - 4622603 | 122167.0 |
| hypothetical protein | HMPREF1065_03801 | Not Available | Negative | 4622659 - 4623591 | 35856.4 |
| rna polymerase sigma-70 factor, expansion family 1 | HMPREF1065_03802 | Not Available | Negative | 4623662 - 4624225 | 22502.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

