Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | CL03T12C01 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1578661 bp
Thymine Count
1570423 bp
Guanine Count
1116965 bp
Cytosine Count
1121200 bp
Genome Length
5387249 bp
Protein-coding Genes
4417 genes
Non-Coding Genes
106 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | HMPREF1065_03773 | Not Available | Negative | 4574311 - 4575246 | 36544.3 |
| hypothetical protein | HMPREF1065_03774 | Not Available | Negative | 4575290 - 4575631 | 13375.0 |
| hypothetical protein | HMPREF1065_03775 | Not Available | Positive | 4576286 - 4577581 | 49643.3 |
| 5,10-methylenetetrahydrofolate reductase | HMPREF1065_03776 | Not Available | Positive | 4577938 - 4578891 | 36139.4 |
| dna polymerase iii, delta' subunit | HMPREF1065_03777 | Not Available | Positive | 4578919 - 4580043 | 43505.9 |
| hypothetical protein | HMPREF1065_03778 | Not Available | Positive | 4580133 - 4581647 | 57609.9 |
| gliding motility-associated lipoprotein gldh | HMPREF1065_03779 | Not Available | Positive | 4581610 - 4582107 | 18852.7 |
| rod shape-determining protein roda | HMPREF1065_03780 | Not Available | Negative | 4582111 - 4583565 | 54224.5 |
| penicillin-binding protein 2 | HMPREF1065_03781 | Not Available | Negative | 4583546 - 4585396 | 69087.3 |
| rod shape-determining protein mred | HMPREF1065_03782 | Not Available | Negative | 4585396 - 4585896 | 18960.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

