Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | CL03T12C01 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1578661 bp
Thymine Count
1570423 bp
Guanine Count
1116965 bp
Cytosine Count
1121200 bp
Genome Length
5387249 bp
Protein-coding Genes
4417 genes
Non-Coding Genes
106 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | HMPREF1065_03764 | Not Available | Positive | 4562969 - 4564465 | 56718.5 |
| susc/raga family tonb-linked outer membrane protein | HMPREF1065_03765 | Not Available | Positive | 4564649 - 4567513 | 106281.0 |
| hypothetical protein | HMPREF1065_03766 | Not Available | Positive | 4567616 - 4569157 | 57984.3 |
| tigr02254 family had hydrolase | HMPREF1065_03767 | Not Available | Negative | 4569340 - 4570029 | 26986.8 |
| hypothetical protein | HMPREF1065_03768 | Not Available | Negative | 4570106 - 4570954 | 31531.5 |
| hypothetical protein | HMPREF1065_03769 | Not Available | Negative | 4570983 - 4571729 | 27809.8 |
| thymidine kinase | HMPREF1065_03770 | Not Available | Positive | 4571788 - 4572462 | 25362.8 |
| hypothetical protein | HMPREF1065_03771 | Not Available | Positive | 4572473 - 4573609 | 42837.3 |
| Trna-lys | Not Available | Not Available | Positive | 4573701 - 4573776 | Not Available |
| hypothetical protein | HMPREF1065_03772 | Not Available | Negative | 4574062 - 4574307 | 9599.92 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

