Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | CL03T12C01 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1578661 bp
Thymine Count
1570423 bp
Guanine Count
1116965 bp
Cytosine Count
1121200 bp
Genome Length
5387249 bp
Protein-coding Genes
4417 genes
Non-Coding Genes
106 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | HMPREF1065_03614 | Not Available | Positive | 4382238 - 4382708 | 17095.6 |
| upf0365 protein | HMPREF1065_03615 | Not Available | Positive | 4382854 - 4383852 | 35992.8 |
| hypothetical protein | HMPREF1065_03616 | Not Available | Positive | 4384045 - 4384923 | 32856.7 |
| hypothetical protein | HMPREF1065_03617 | Not Available | Positive | 4385133 - 4385618 | 18036.6 |
| trna modification gtpase mnme | HMPREF1065_03618 | Not Available | Positive | 4385629 - 4387125 | 55260.4 |
| excisionase family dna binding domain-containing protein | HMPREF1065_03619 | Not Available | Positive | 4387169 - 4388272 | 42990.4 |
| hypothetical protein | HMPREF1065_03620 | Not Available | Positive | 4388365 - 4389471 | 43166.5 |
| hypothetical protein | HMPREF1065_03621 | Not Available | Negative | 4389520 - 4390365 | 32746.5 |
| hypothetical protein | HMPREF1065_03622 | Not Available | Positive | 4390496 - 4391383 | 33448.7 |
| hypothetical protein | HMPREF1065_03623 | Not Available | Negative | 4391404 - 4394709 | 127848.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

