Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | CL03T12C01 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1578661 bp
Thymine Count
1570423 bp
Guanine Count
1116965 bp
Cytosine Count
1121200 bp
Genome Length
5387249 bp
Protein-coding Genes
4417 genes
Non-Coding Genes
106 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | HMPREF1065_03594 | Not Available | Positive | 4361217 - 4364015 | 105357.0 |
| hypothetical protein | HMPREF1065_03595 | Not Available | Positive | 4364030 - 4365517 | 57408.7 |
| hypothetical protein | HMPREF1065_03596 | Not Available | Positive | 4365530 - 4366237 | 26489.8 |
| hypothetical protein | HMPREF1065_03597 | Not Available | Positive | 4366234 - 4366746 | 19390.4 |
| had hydrolase, family ia | HMPREF1065_03598 | Not Available | Positive | 4366802 - 4368868 | 79486.6 |
| 50s ribosomal protein l21 | HMPREF1065_03599 | Not Available | Positive | 4369087 - 4369404 | 11743.4 |
| 50s ribosomal protein l27 | HMPREF1065_03600 | Not Available | Positive | 4369426 - 4369689 | 9252.17 |
| thiamine pyrophosphokinase | HMPREF1065_03601 | Not Available | Negative | 4369747 - 4370382 | 23824.7 |
| nicotinamide mononucleotide transporter pnuc | HMPREF1065_03602 | Not Available | Negative | 4370369 - 4370941 | 22158.6 |
| serine-trna ligase | HMPREF1065_03603 | Not Available | Positive | 4371061 - 4372335 | 47900.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

