Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | CL03T12C01 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1578661 bp
Thymine Count
1570423 bp
Guanine Count
1116965 bp
Cytosine Count
1121200 bp
Genome Length
5387249 bp
Protein-coding Genes
4417 genes
Non-Coding Genes
106 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | HMPREF1065_03574 | Not Available | Negative | 4338930 - 4340462 | 56293.1 |
| rsme family rna methyltransferase | HMPREF1065_03575 | Not Available | Negative | 4340467 - 4341168 | 26191.7 |
| hypothetical protein | HMPREF1065_03576 | Not Available | Negative | 4341196 - 4341810 | 23210.1 |
| nucleoside transporter | HMPREF1065_03577 | Not Available | Negative | 4341821 - 4343098 | 46913.4 |
| hypothetical protein | HMPREF1065_03578 | Not Available | Negative | 4343300 - 4343914 | 23012.8 |
| hypothetical protein | HMPREF1065_03579 | Not Available | Negative | 4343933 - 4344499 | 21224.2 |
| sigma-70 family rna polymerase sigma factor | HMPREF1065_03580 | Not Available | Negative | 4344490 - 4344960 | 18051.1 |
| hypothetical protein | HMPREF1065_03581 | Not Available | Negative | 4345146 - 4346279 | 42103.5 |
| hypothetical protein | HMPREF1065_03582 | Not Available | Negative | 4346405 - 4347964 | 56869.9 |
| hypothetical protein | HMPREF1065_03583 | Not Available | Negative | 4347971 - 4349935 | 74273.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

