Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | CL03T12C01 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1578661 bp
Thymine Count
1570423 bp
Guanine Count
1116965 bp
Cytosine Count
1121200 bp
Genome Length
5387249 bp
Protein-coding Genes
4417 genes
Non-Coding Genes
106 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | HMPREF1065_03564 | Not Available | Negative | 4330111 - 4330545 | 16948.2 |
| hypothetical protein | HMPREF1065_03565 | Not Available | Negative | 4330553 - 4330657 | 3505.49 |
| hypothetical protein | HMPREF1065_03566 | Not Available | Positive | 4330788 - 4330964 | 6861.56 |
| rna polymerase sigma-70 factor, expansion family 1 | HMPREF1065_03567 | Not Available | Positive | 4331184 - 4331765 | 23101.9 |
| hypothetical protein | HMPREF1065_03568 | Not Available | Negative | 4331894 - 4335328 | 128674.0 |
| hypothetical protein | HMPREF1065_03569 | Not Available | Negative | 4335362 - 4335487 | 4948.13 |
| hypothetical protein | HMPREF1065_03570 | Not Available | Negative | 4335662 - 4336267 | 23482.1 |
| secondary thiamine-phosphate synthase enzyme | HMPREF1065_03571 | Not Available | Negative | 4336668 - 4337081 | 15519.7 |
| hypothetical protein | HMPREF1065_03572 | Not Available | Negative | 4337090 - 4338292 | 44809.1 |
| hypothetical protein | HMPREF1065_03573 | Not Available | Negative | 4338289 - 4338933 | 24483.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

