Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | CL03T12C01 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1578661 bp
Thymine Count
1570423 bp
Guanine Count
1116965 bp
Cytosine Count
1121200 bp
Genome Length
5387249 bp
Protein-coding Genes
4417 genes
Non-Coding Genes
106 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | HMPREF1065_03554 | Not Available | Negative | 4313885 - 4315432 | 60158.3 |
| hypothetical protein | HMPREF1065_03555 | Not Available | Negative | 4315582 - 4317135 | 57452.0 |
| hypothetical protein | HMPREF1065_03556 | Not Available | Negative | 4317181 - 4318122 | 36147.1 |
| hypothetical protein | HMPREF1065_03557 | Not Available | Negative | 4318470 - 4318817 | 13175.3 |
| hypothetical protein | HMPREF1065_03558 | Not Available | Positive | 4319191 - 4319445 | 9849.22 |
| hypothetical protein | HMPREF1065_03559 | Not Available | Negative | 4319823 - 4322339 | 96204.1 |
| hypothetical protein | HMPREF1065_03560 | Not Available | Negative | 4322481 - 4324469 | 74930.0 |
| susc/raga family tonb-linked outer membrane protein | HMPREF1065_03561 | Not Available | Negative | 4324483 - 4327995 | 130666.0 |
| hypothetical protein | HMPREF1065_03562 | Not Available | Negative | 4328168 - 4329178 | 38675.3 |
| hypothetical protein | HMPREF1065_03563 | Not Available | Negative | 4329267 - 4329485 | 7917.28 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

