Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | CL03T12C01 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1578661 bp
Thymine Count
1570423 bp
Guanine Count
1116965 bp
Cytosine Count
1121200 bp
Genome Length
5387249 bp
Protein-coding Genes
4417 genes
Non-Coding Genes
106 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| efflux transporter, rnd family, mfp subunit | HMPREF1065_03544 | Not Available | Positive | 4300227 - 4301378 | 43896.4 |
| hydrophobe/amphiphile efflux-1 (hae1) family rnd transporter | HMPREF1065_03545 | Not Available | Positive | 4301391 - 4304540 | 115654.0 |
| nodt family efflux transporter, outer membrane factor (omf) lipoprotein | HMPREF1065_03546 | Not Available | Positive | 4304518 - 4305975 | 54847.0 |
| hypothetical protein | HMPREF1065_03547 | Not Available | Negative | 4306063 - 4306314 | 8740.28 |
| hypothetical protein | HMPREF1065_03548 | Not Available | Negative | 4307052 - 4307324 | 10510.9 |
| hypothetical protein | HMPREF1065_03549 | Not Available | Negative | 4307321 - 4307434 | 4416.31 |
| hypothetical protein | HMPREF1065_03550 | Not Available | Negative | 4307465 - 4308700 | 46896.1 |
| hypothetical protein | HMPREF1065_03551 | Not Available | Negative | 4308693 - 4310312 | 62152.8 |
| hypothetical protein | HMPREF1065_03552 | Not Available | Negative | 4310316 - 4311842 | 57506.6 |
| hypothetical protein | HMPREF1065_03553 | Not Available | Negative | 4311849 - 4313879 | 77630.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

