Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | CL03T12C01 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1578661 bp
Thymine Count
1570423 bp
Guanine Count
1116965 bp
Cytosine Count
1121200 bp
Genome Length
5387249 bp
Protein-coding Genes
4417 genes
Non-Coding Genes
106 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | HMPREF1065_03534 | Not Available | Positive | 4289985 - 4290497 | 19721.3 |
| 3-deoxy-8-phosphooctulonate synthase | HMPREF1065_03535 | Not Available | Negative | 4290660 - 4291457 | 28935.4 |
| yegs//bmru family lipid kinase | HMPREF1065_03536 | Not Available | Negative | 4291530 - 4292459 | 35359.1 |
| trna dimethylallyltransferase 2 | HMPREF1065_03537 | Not Available | Negative | 4292465 - 4293388 | 35639.2 |
| glyceraldehyde-3-phosphate dehydrogenase a | HMPREF1065_03538 | Not Available | Negative | 4293509 - 4294519 | 35961.1 |
| large-conductance mechanosensitive channel | HMPREF1065_03539 | Not Available | Positive | 4294671 - 4295111 | 15821.7 |
| gmp synthase | HMPREF1065_03540 | Not Available | Positive | 4295347 - 4296900 | 57658.2 |
| gmp synthase (glutamine-hydrolyzing) domain-containing protein | HMPREF1065_03541 | Not Available | Positive | 4296939 - 4298246 | 48309.5 |
| hypothetical protein | HMPREF1065_03542 | Not Available | Negative | 4298405 - 4299565 | 42376.8 |
| hypothetical protein | HMPREF1065_03543 | Not Available | Positive | 4299682 - 4300104 | 15998.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

