Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | CL03T12C01 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1578661 bp
Thymine Count
1570423 bp
Guanine Count
1116965 bp
Cytosine Count
1121200 bp
Genome Length
5387249 bp
Protein-coding Genes
4417 genes
Non-Coding Genes
106 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | HMPREF1065_03516 | Not Available | Positive | 4259935 - 4260597 | 25856.4 |
| hypothetical protein | HMPREF1065_03517 | Not Available | Positive | 4260634 - 4261959 | 49677.7 |
| efflux transporter, rnd family, mfp subunit | HMPREF1065_03518 | Not Available | Positive | 4261983 - 4263005 | 37621.8 |
| hydrophobe/amphiphile efflux-1 (hae1) family rnd transporter | HMPREF1065_03519 | Not Available | Positive | 4263094 - 4266264 | 115730.0 |
| hypothetical protein | HMPREF1065_03520 | Not Available | Positive | 4266337 - 4266630 | 11210.5 |
| hypothetical protein | HMPREF1065_03521 | Not Available | Positive | 4266767 - 4268134 | 50919.0 |
| hypothetical protein | HMPREF1065_03522 | Not Available | Positive | 4268121 - 4269083 | 36090.8 |
| hypothetical protein | HMPREF1065_03523 | Not Available | Positive | 4269061 - 4270542 | 57325.8 |
| hypothetical protein | HMPREF1065_03524 | Not Available | Negative | 4270888 - 4271115 | 8797.6 |
| hypothetical protein | HMPREF1065_03525 | Not Available | Negative | 4271162 - 4271458 | 11637.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

