Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | CL03T12C01 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1578661 bp
Thymine Count
1570423 bp
Guanine Count
1116965 bp
Cytosine Count
1121200 bp
Genome Length
5387249 bp
Protein-coding Genes
4417 genes
Non-Coding Genes
106 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | HMPREF1065_03506 | Not Available | Positive | 4244566 - 4245768 | 43282.3 |
| hypothetical protein | HMPREF1065_03507 | Not Available | Negative | 4246627 - 4247403 | 29145.1 |
| hypothetical protein | HMPREF1065_03508 | Not Available | Negative | 4247412 - 4248560 | 42418.7 |
| glutamate dehydrogenase | HMPREF1065_03509 | Not Available | Negative | 4248716 - 4250050 | 49046.8 |
| hypothetical protein | HMPREF1065_03510 | Not Available | Negative | 4250206 - 4250388 | 6755.83 |
| hypothetical protein | HMPREF1065_03511 | Not Available | Negative | 4250512 - 4252797 | 84210.2 |
| efflux transporter, rnd family, mfp subunit | HMPREF1065_03512 | Not Available | Positive | 4253253 - 4254458 | 43454.1 |
| hydrophobe/amphiphile efflux-1 (hae1) family rnd transporter | HMPREF1065_03513 | Not Available | Positive | 4254508 - 4257726 | 116974.0 |
| nodt family efflux transporter, outer membrane factor (omf) lipoprotein | HMPREF1065_03514 | Not Available | Positive | 4257738 - 4259123 | 50367.3 |
| acyl-[acyl-carrier-protein]-udp-n- acetylglucosamine o-acyltransferase | HMPREF1065_03515 | Not Available | Positive | 4259147 - 4259914 | 27567.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

