Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | CL03T12C01 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1578661 bp
Thymine Count
1570423 bp
Guanine Count
1116965 bp
Cytosine Count
1121200 bp
Genome Length
5387249 bp
Protein-coding Genes
4417 genes
Non-Coding Genes
106 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| branched-chain amino acid aminotransferase | HMPREF1065_03486 | Not Available | Positive | 4221320 - 4222339 | 37862.2 |
| hypothetical protein | HMPREF1065_03487 | Not Available | Positive | 4222357 - 4222983 | 23274.0 |
| trna (guanine-n(7)-)-methyltransferase | HMPREF1065_03488 | Not Available | Positive | 4223105 - 4223863 | 29767.7 |
| hypothetical protein | HMPREF1065_03489 | Not Available | Positive | 4223871 - 4224974 | 39763.3 |
| tonb family domain-containing protein | HMPREF1065_03490 | Not Available | Negative | 4225041 - 4226888 | 69424.3 |
| hypothetical protein | HMPREF1065_03491 | Not Available | Negative | 4226911 - 4227276 | 14105.0 |
| hypothetical protein | HMPREF1065_03492 | Not Available | Negative | 4227462 - 4227887 | 15725.5 |
| hypothetical protein | HMPREF1065_03493 | Not Available | Negative | 4227926 - 4229176 | 47613.9 |
| hypothetical protein | HMPREF1065_03494 | Not Available | Negative | 4229191 - 4230366 | 44168.9 |
| hypothetical protein | HMPREF1065_03495 | Not Available | Negative | 4230373 - 4231359 | 35955.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

