Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | CL03T12C01 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1578661 bp
Thymine Count
1570423 bp
Guanine Count
1116965 bp
Cytosine Count
1121200 bp
Genome Length
5387249 bp
Protein-coding Genes
4417 genes
Non-Coding Genes
106 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | HMPREF1065_03476 | Not Available | Positive | 4209321 - 4211627 | 87053.4 |
| hypothetical protein | HMPREF1065_03477 | Not Available | Negative | 4211646 - 4212233 | 23231.6 |
| hypothetical protein | HMPREF1065_03478 | Not Available | Negative | 4212354 - 4213280 | 35716.4 |
| hypothetical protein | HMPREF1065_03479 | Not Available | Negative | 4213424 - 4213828 | 14849.9 |
| hypothetical protein | HMPREF1065_03480 | Not Available | Negative | 4213983 - 4215839 | 72926.4 |
| hypothetical protein | HMPREF1065_03481 | Not Available | Negative | 4216071 - 4216700 | 23564.2 |
| mate efflux family protein | HMPREF1065_03482 | Not Available | Negative | 4216754 - 4218124 | 49543.2 |
| hypothetical protein | HMPREF1065_03483 | Not Available | Positive | 4218245 - 4219618 | 50050.0 |
| exodeoxyribonuclease vii, large subunit | HMPREF1065_03484 | Not Available | Positive | 4219618 - 4220925 | 49600.9 |
| hypothetical protein | HMPREF1065_03485 | Not Available | Positive | 4220934 - 4221137 | 7823.46 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

