Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | CL03T12C01 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1578661 bp
Thymine Count
1570423 bp
Guanine Count
1116965 bp
Cytosine Count
1121200 bp
Genome Length
5387249 bp
Protein-coding Genes
4417 genes
Non-Coding Genes
106 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | HMPREF1065_03446 | Not Available | Positive | 4172302 - 4175529 | 122530.0 |
| hypothetical protein | HMPREF1065_03447 | Not Available | Negative | 4175713 - 4177530 | 68298.9 |
| susc/raga family tonb-linked outer membrane protein | HMPREF1065_03448 | Not Available | Negative | 4177543 - 4180626 | 114644.0 |
| dtdp-glucose 4,6-dehydratase | HMPREF1065_03449 | Not Available | Negative | 4181108 - 4182247 | 43722.0 |
| mj0936 family phosphodiesterase | HMPREF1065_03450 | Not Available | Negative | 4182296 - 4182793 | 18707.5 |
| polyphosphate kinase 1 | HMPREF1065_03451 | Not Available | Positive | 4182851 - 4184905 | 80488.6 |
| hypothetical protein | HMPREF1065_03452 | Not Available | Positive | 4185135 - 4185296 | 5892.96 |
| hypothetical protein | HMPREF1065_03453 | Not Available | Positive | 4185904 - 4186296 | 14729.9 |
| hypothetical protein | HMPREF1065_03454 | Not Available | Negative | 4186262 - 4186843 | 23420.5 |
| radical sam additional 4fe4s-binding domain-containing protein | HMPREF1065_03455 | Not Available | Negative | 4186836 - 4188347 | 58136.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

