Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | CL03T12C01 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1578661 bp
Thymine Count
1570423 bp
Guanine Count
1116965 bp
Cytosine Count
1121200 bp
Genome Length
5387249 bp
Protein-coding Genes
4417 genes
Non-Coding Genes
106 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | HMPREF1065_03436 | Not Available | Positive | 4153698 - 4155188 | 55950.7 |
| methylmalonyl-coa mutase large subunit | HMPREF1065_03437 | Not Available | Negative | 4155513 - 4157663 | 79110.7 |
| methylmalonyl-coa mutase, small subunit | HMPREF1065_03438 | Not Available | Negative | 4157673 - 4159583 | 70630.6 |
| aspt/yide/ybjl antiporter duplication domain-containing protein | HMPREF1065_03439 | Not Available | Positive | 4159870 - 4161540 | 60143.8 |
| hypothetical protein | HMPREF1065_03440 | Not Available | Positive | 4161652 - 4163286 | 62073.9 |
| rna polymerase sigma-70 factor, expansion family 1 | HMPREF1065_03441 | Not Available | Positive | 4163326 - 4163907 | 22683.5 |
| hypothetical protein | HMPREF1065_03442 | Not Available | Positive | 4164038 - 4165024 | 38459.2 |
| susc/raga family tonb-linked outer membrane protein | HMPREF1065_03443 | Not Available | Positive | 4165170 - 4168586 | 126315.0 |
| hypothetical protein | HMPREF1065_03444 | Not Available | Positive | 4168607 - 4170142 | 58961.3 |
| hypothetical protein | HMPREF1065_03445 | Not Available | Positive | 4170174 - 4172243 | 78066.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

