Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | CL03T12C01 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1578661 bp
Thymine Count
1570423 bp
Guanine Count
1116965 bp
Cytosine Count
1121200 bp
Genome Length
5387249 bp
Protein-coding Genes
4417 genes
Non-Coding Genes
106 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | HMPREF1065_03396 | Not Available | Positive | 4104554 - 4105234 | 25987.5 |
| hypothetical protein | HMPREF1065_03397 | Not Available | Positive | 4105587 - 4106204 | 22851.5 |
| hypothetical protein | HMPREF1065_03398 | Not Available | Positive | 4106209 - 4106637 | 16181.7 |
| hypothetical protein | HMPREF1065_03399 | Not Available | Negative | 4107503 - 4108003 | 18987.3 |
| histidine ammonia-lyase | HMPREF1065_03400 | Not Available | Negative | 4108121 - 4109617 | 55255.1 |
| hypothetical protein | HMPREF1065_03401 | Not Available | Negative | 4109652 - 4110275 | 23001.8 |
| imidazolonepropionase | HMPREF1065_03402 | Not Available | Negative | 4110296 - 4111540 | 44895.3 |
| glutamate formiminotransferase | HMPREF1065_03403 | Not Available | Negative | 4111555 - 4112457 | 33498.6 |
| urocanate hydratase | HMPREF1065_03404 | Not Available | Negative | 4112466 - 4114463 | 74552.1 |
| hypothetical protein | HMPREF1065_03405 | Not Available | Negative | 4114707 - 4115738 | 39929.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

