Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | CL03T12C01 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1578661 bp
Thymine Count
1570423 bp
Guanine Count
1116965 bp
Cytosine Count
1121200 bp
Genome Length
5387249 bp
Protein-coding Genes
4417 genes
Non-Coding Genes
106 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| iron-only hydrogenase maturation rsam protein hyde | HMPREF1065_03387 | Not Available | Negative | 4092805 - 4093842 | 38984.0 |
| hypothetical protein | HMPREF1065_03388 | Not Available | Negative | 4094042 - 4095790 | 65095.6 |
| chaperonin | HMPREF1065_03389 | Not Available | Positive | 4095886 - 4096158 | 9740.92 |
| chaperonin | HMPREF1065_03390 | Not Available | Positive | 4096200 - 4097837 | 58147.1 |
| Trna-thr | Not Available | Not Available | Positive | 4098076 - 4098149 | Not Available |
| mate efflux family protein | HMPREF1065_03391 | Not Available | Positive | 4098301 - 4099653 | 49518.4 |
| hypothetical protein | HMPREF1065_03392 | Not Available | Positive | 4099689 - 4100273 | 22252.7 |
| hypothetical protein | HMPREF1065_03393 | Not Available | Positive | 4100463 - 4101002 | 19927.5 |
| glycosyl hydrolase family 109 protein 1 | HMPREF1065_03394 | Not Available | Negative | 4101127 - 4102542 | 53490.0 |
| hypothetical protein | HMPREF1065_03395 | Not Available | Negative | 4102824 - 4103795 | 37985.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

