Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | CL03T12C01 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1578661 bp
Thymine Count
1570423 bp
Guanine Count
1116965 bp
Cytosine Count
1121200 bp
Genome Length
5387249 bp
Protein-coding Genes
4417 genes
Non-Coding Genes
106 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | HMPREF1065_03357 | Not Available | Positive | 4050554 - 4052911 | 88916.5 |
| hypothetical protein | HMPREF1065_03358 | Not Available | Positive | 4053046 - 4053957 | 33769.1 |
| hypothetical protein | HMPREF1065_03359 | Not Available | Negative | 4054061 - 4054963 | 35296.9 |
| hypothetical protein | HMPREF1065_03360 | Not Available | Positive | 4055175 - 4055855 | 24715.3 |
| hypothetical protein | HMPREF1065_03361 | Not Available | Positive | 4056015 - 4057397 | 53236.0 |
| rna polymerase sigma-70 factor, expansion family 1 | HMPREF1065_03362 | Not Available | Positive | 4057400 - 4058002 | 23592.8 |
| hypothetical protein | HMPREF1065_03363 | Not Available | Positive | 4058067 - 4059053 | 38558.9 |
| susc/raga family tonb-linked outer membrane protein | HMPREF1065_03364 | Not Available | Positive | 4059082 - 4062351 | 122346.0 |
| hypothetical protein | HMPREF1065_03365 | Not Available | Positive | 4062371 - 4064068 | 64645.3 |
| hypothetical protein | HMPREF1065_03366 | Not Available | Positive | 4064244 - 4068566 | 164913.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

