Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | CL03T12C01 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1578661 bp
Thymine Count
1570423 bp
Guanine Count
1116965 bp
Cytosine Count
1121200 bp
Genome Length
5387249 bp
Protein-coding Genes
4417 genes
Non-Coding Genes
106 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Trna-val | Not Available | Not Available | Positive | 4009904 - 4009981 | Not Available |
| hypothetical protein | HMPREF1065_03329 | Not Available | Positive | 4010049 - 4010699 | 24825.4 |
| pp_03330 | HMPREF1065_03330 | Not Available | Negative | 4010696 - 4011760 | Not Available |
| cysteine synthase a | HMPREF1065_03331 | Not Available | Negative | 4011770 - 4012717 | 33444.5 |
| hypothetical protein | HMPREF1065_03332 | Not Available | Positive | 4012863 - 4013801 | 35227.1 |
| hypothetical protein | HMPREF1065_03333 | Not Available | Positive | 4013824 - 4016280 | 89698.4 |
| hypothetical protein | HMPREF1065_03334 | Not Available | Positive | 4016481 - 4017785 | 48206.5 |
| susc/raga family tonb-linked outer membrane protein | HMPREF1065_03335 | Not Available | Positive | 4018450 - 4021686 | 120067.0 |
| hypothetical protein | HMPREF1065_03336 | Not Available | Positive | 4021707 - 4023722 | 76013.5 |
| hypothetical protein | HMPREF1065_03337 | Not Available | Negative | 4023674 - 4023841 | 6327.62 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

