Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | CL03T12C01 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1578661 bp
Thymine Count
1570423 bp
Guanine Count
1116965 bp
Cytosine Count
1121200 bp
Genome Length
5387249 bp
Protein-coding Genes
4417 genes
Non-Coding Genes
106 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sulfate adenylyltransferase subunit 1 | HMPREF1065_03320 | Not Available | Positive | 3995911 - 3997368 | 54592.6 |
| hypothetical protein | HMPREF1065_03321 | Not Available | Positive | 3997395 - 3998501 | 43411.3 |
| hypothetical protein | HMPREF1065_03322 | Not Available | Negative | 3998577 - 3999776 | 43736.0 |
| hypothetical protein | HMPREF1065_03323 | Not Available | Negative | 3999883 - 4000650 | 29372.4 |
| hypothetical protein | HMPREF1065_03324 | Not Available | Positive | 4000738 - 4001238 | 19114.3 |
| hypothetical protein | HMPREF1065_03325 | Not Available | Positive | 4001259 - 4004063 | 106772.0 |
| carbamoyl-phosphate synthase, large subunit | HMPREF1065_03326 | Not Available | Negative | 4004129 - 4007350 | 119523.0 |
| hypothetical protein | HMPREF1065_03327 | Not Available | Negative | 4007605 - 4008396 | 29916.7 |
| tryptophan-trna ligase | HMPREF1065_03328 | Not Available | Positive | 4008500 - 4009594 | 41372.8 |
| Trna-val | Not Available | Not Available | Positive | 4009808 - 4009882 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

