Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | CL03T12C01 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1578661 bp
Thymine Count
1570423 bp
Guanine Count
1116965 bp
Cytosine Count
1121200 bp
Genome Length
5387249 bp
Protein-coding Genes
4417 genes
Non-Coding Genes
106 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | HMPREF1065_03310 | Not Available | Positive | 3984368 - 3985240 | 34122.5 |
| hypothetical protein | HMPREF1065_03311 | Not Available | Positive | 3985245 - 3986603 | 52201.7 |
| hypothetical protein | HMPREF1065_03312 | Not Available | Positive | 3986621 - 3988288 | 63908.4 |
| hypothetical protein | HMPREF1065_03313 | Not Available | Positive | 3988291 - 3988587 | 11724.6 |
| dna mismatch repair protein mutl | HMPREF1065_03314 | Not Available | Positive | 3988609 - 3990477 | 68806.0 |
| hypothetical protein | HMPREF1065_03315 | Not Available | Positive | 3990706 - 3991914 | 45907.2 |
| 3'(2'),5'-bisphosphate nucleotidase | HMPREF1065_03316 | Not Available | Positive | 3991929 - 3992738 | 30521.4 |
| hypothetical protein | HMPREF1065_03317 | Not Available | Positive | 3992751 - 3994307 | 56739.9 |
| adenylyl-sulfate kinase | HMPREF1065_03318 | Not Available | Positive | 3994337 - 3994951 | 22749.6 |
| sulfate adenylyltransferase subunit 2 | HMPREF1065_03319 | Not Available | Positive | 3994963 - 3995874 | 35744.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

