Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | CL03T12C01 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1578661 bp
Thymine Count
1570423 bp
Guanine Count
1116965 bp
Cytosine Count
1121200 bp
Genome Length
5387249 bp
Protein-coding Genes
4417 genes
Non-Coding Genes
106 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | HMPREF1065_03300 | Not Available | Negative | 3972893 - 3973660 | 28393.8 |
| hypothetical protein | HMPREF1065_03301 | Not Available | Positive | 3973765 - 3974586 | 31091.3 |
| hypothetical protein | HMPREF1065_03302 | Not Available | Negative | 3974659 - 3974904 | 9049.81 |
| trigger factor | HMPREF1065_03303 | Not Available | Positive | 3975287 - 3976642 | 51457.6 |
| atp-dependent clp protease proteolytic subunit | HMPREF1065_03304 | Not Available | Positive | 3976823 - 3977494 | 24894.8 |
| atp-dependent clp protease atp-binding subunit clpx | HMPREF1065_03305 | Not Available | Positive | 3977619 - 3978869 | 46693.9 |
| atp-dependent dna helicase recq | HMPREF1065_03306 | Not Available | Positive | 3979027 - 3981207 | 81679.6 |
| hypothetical protein | HMPREF1065_03307 | Not Available | Negative | 3981356 - 3981496 | 5581.07 |
| inosine-5'-monophosphate dehydrogenase | HMPREF1065_03308 | Not Available | Positive | 3981505 - 3982980 | 52718.0 |
| hypothetical protein | HMPREF1065_03309 | Not Available | Positive | 3982994 - 3984331 | 51748.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

