Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | CL03T12C01 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1578661 bp
Thymine Count
1570423 bp
Guanine Count
1116965 bp
Cytosine Count
1121200 bp
Genome Length
5387249 bp
Protein-coding Genes
4417 genes
Non-Coding Genes
106 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | HMPREF1065_03252 | Not Available | Positive | 3909505 - 3910530 | 39456.2 |
| hypothetical protein | HMPREF1065_03253 | Not Available | Negative | 3910553 - 3911383 | 31943.4 |
| 2-c-methyl-d-erythritol 4-phosphate cytidylyltransferase | HMPREF1065_03254 | Not Available | Positive | 3911475 - 3912842 | 50844.2 |
| hypothetical protein | HMPREF1065_03255 | Not Available | Positive | 3912839 - 3913654 | 31469.0 |
| hypothetical protein | HMPREF1065_03256 | Not Available | Positive | 3913651 - 3914667 | 40514.6 |
| hypothetical protein | HMPREF1065_03257 | Not Available | Positive | 3914640 - 3915755 | 42777.2 |
| hypothetical protein | HMPREF1065_03258 | Not Available | Positive | 3915768 - 3917030 | 47725.6 |
| hypothetical protein | HMPREF1065_03259 | Not Available | Positive | 3917023 - 3917769 | 28664.4 |
| hypothetical protein | HMPREF1065_03260 | Not Available | Negative | 3917796 - 3920288 | 93124.6 |
| mta/sah nucleosidase | HMPREF1065_03261 | Not Available | Positive | 3920373 - 3921068 | 25492.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

