Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | CL03T12C01 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1578661 bp
Thymine Count
1570423 bp
Guanine Count
1116965 bp
Cytosine Count
1121200 bp
Genome Length
5387249 bp
Protein-coding Genes
4417 genes
Non-Coding Genes
106 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tyrosine recombinase xerd | HMPREF1065_03242 | Not Available | Positive | 3897871 - 3898797 | 35648.5 |
| hypothetical protein | HMPREF1065_03243 | Not Available | Positive | 3898956 - 3900632 | 60891.9 |
| hypothetical protein | HMPREF1065_03244 | Not Available | Positive | 3900785 - 3901852 | 40605.2 |
| mg chelatase-like protein | HMPREF1065_03245 | Not Available | Positive | 3901857 - 3903395 | 56266.9 |
| hypothetical protein | HMPREF1065_03246 | Not Available | Negative | 3903397 - 3903564 | 6558.68 |
| hypothetical protein | HMPREF1065_03247 | Not Available | Negative | 3903619 - 3904107 | 18354.7 |
| hypothetical protein | HMPREF1065_03248 | Not Available | Negative | 3904139 - 3904618 | 17980.5 |
| radical sam additional 4fe4s-binding domain-containing protein | HMPREF1065_03249 | Not Available | Negative | 3904630 - 3905712 | 41750.3 |
| methionyl-trna synthetase | HMPREF1065_03250 | Not Available | Positive | 3905945 - 3907987 | 77766.9 |
| hypothetical protein | HMPREF1065_03251 | Not Available | Positive | 3908069 - 3909505 | 53494.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

