Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | CL03T12C01 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1578661 bp
Thymine Count
1570423 bp
Guanine Count
1116965 bp
Cytosine Count
1121200 bp
Genome Length
5387249 bp
Protein-coding Genes
4417 genes
Non-Coding Genes
106 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| outer membrane protein assembly complex, yaet protein | HMPREF1065_03232 | Not Available | Positive | 3887576 - 3890215 | 100661.0 |
| hypothetical protein | HMPREF1065_03233 | Not Available | Positive | 3890236 - 3890751 | 18967.6 |
| hypothetical protein | HMPREF1065_03234 | Not Available | Positive | 3890809 - 3891312 | 19288.3 |
| glutamate racemase | HMPREF1065_03235 | Not Available | Positive | 3891388 - 3892260 | 32355.2 |
| pyridoxal kinase | HMPREF1065_03236 | Not Available | Positive | 3892317 - 3893189 | 32875.6 |
| hypothetical protein | HMPREF1065_03237 | Not Available | Negative | 3893575 - 3894813 | 45814.1 |
| ribosome-binding factor a | HMPREF1065_03238 | Not Available | Negative | 3894823 - 3895158 | 12972.9 |
| hypothetical protein | HMPREF1065_03239 | Not Available | Negative | 3895232 - 3895870 | 24386.5 |
| pyruvate kinase | HMPREF1065_03240 | Not Available | Negative | 3895886 - 3897349 | 54241.6 |
| 3-dehydroquinate dehydratase, type ii | HMPREF1065_03241 | Not Available | Negative | 3897382 - 3897804 | 15744.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

