Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | CL03T12C01 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1578661 bp
Thymine Count
1570423 bp
Guanine Count
1116965 bp
Cytosine Count
1121200 bp
Genome Length
5387249 bp
Protein-coding Genes
4417 genes
Non-Coding Genes
106 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | HMPREF1065_03222 | Not Available | Negative | 3878566 - 3879558 | 36877.1 |
| argininosuccinate lyase | HMPREF1065_03223 | Not Available | Negative | 3879582 - 3880922 | 50507.2 |
| hypothetical protein | HMPREF1065_03224 | Not Available | Negative | 3880938 - 3881342 | 15213.7 |
| orotate phosphoribosyltransferase | HMPREF1065_03225 | Not Available | Negative | 3881440 - 3882078 | 23402.3 |
| comf family protein | HMPREF1065_03226 | Not Available | Negative | 3882178 - 3882690 | 18949.1 |
| hypothetical protein | HMPREF1065_03227 | Not Available | Negative | 3882854 - 3883339 | 18844.6 |
| protein-(glutamine-n5) methyltransferase, release factor-specific | HMPREF1065_03228 | Not Available | Negative | 3883341 - 3884177 | 31727.3 |
| riboflavin biosynthesis protein ribd | HMPREF1065_03229 | Not Available | Positive | 3884222 - 3885289 | 40275.2 |
| hypothetical protein | HMPREF1065_03230 | Not Available | Positive | 3885402 - 3886799 | 52235.9 |
| undecaprenyl pyrophosphate synthase | HMPREF1065_03231 | Not Available | Positive | 3886833 - 3887564 | 28104.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

