Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | CL03T12C01 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1578661 bp
Thymine Count
1570423 bp
Guanine Count
1116965 bp
Cytosine Count
1121200 bp
Genome Length
5387249 bp
Protein-coding Genes
4417 genes
Non-Coding Genes
106 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | HMPREF1065_03110 | Not Available | Negative | 3721461 - 3721886 | 15829.0 |
| 50s ribosomal protein l17 | HMPREF1065_03111 | Not Available | Negative | 3722300 - 3722788 | 17955.6 |
| dna-directed rna polymerase subunit alpha | HMPREF1065_03112 | Not Available | Negative | 3722792 - 3723784 | 37535.1 |
| 30s ribosomal protein s4 | HMPREF1065_03113 | Not Available | Negative | 3723796 - 3724401 | 22540.2 |
| 30s ribosomal protein s11 | HMPREF1065_03114 | Not Available | Negative | 3724518 - 3724907 | 13878.8 |
| 30s ribosomal protein s13 | HMPREF1065_03115 | Not Available | Negative | 3724919 - 3725299 | 14149.3 |
| 50s ribosomal protein l36 | HMPREF1065_03116 | Not Available | Negative | 3725333 - 3725449 | 4586.82 |
| translation initiation factor if-1 | HMPREF1065_03117 | Not Available | Negative | 3725464 - 3725682 | 8235.14 |
| methionine aminopeptidase, type i | HMPREF1065_03118 | Not Available | Negative | 3725684 - 3726481 | 29143.0 |
| preprotein translocase, secy subunit | HMPREF1065_03119 | Not Available | Negative | 3726492 - 3727838 | 49282.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

