Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | CL03T12C01 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1578661 bp
Thymine Count
1570423 bp
Guanine Count
1116965 bp
Cytosine Count
1121200 bp
Genome Length
5387249 bp
Protein-coding Genes
4417 genes
Non-Coding Genes
106 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ybgc/ybaw family acyl-coa thioester hydrolase | HMPREF1065_03100 | Not Available | Negative | 3712776 - 3713219 | 16853.3 |
| o-acetylhomoserine aminocarboxypropyltransferase/cysteine synthase | HMPREF1065_03101 | Not Available | Positive | 3713342 - 3714619 | 47037.8 |
| hypothetical protein | HMPREF1065_03102 | Not Available | Positive | 3714630 - 3715358 | 27032.1 |
| hypothetical protein | HMPREF1065_03103 | Not Available | Positive | 3715695 - 3716180 | 18375.6 |
| sigma-70 family rna polymerase sigma factor | HMPREF1065_03104 | Not Available | Positive | 3716167 - 3716679 | 20087.0 |
| hypothetical protein | HMPREF1065_03105 | Not Available | Positive | 3716666 - 3717196 | 20108.1 |
| hypothetical protein | HMPREF1065_03106 | Not Available | Positive | 3717193 - 3717651 | 17346.3 |
| hypothetical protein | HMPREF1065_03107 | Not Available | Negative | 3717906 - 3718577 | 23980.6 |
| hypothetical protein | HMPREF1065_03108 | Not Available | Positive | 3718880 - 3720709 | 69749.2 |
| hypothetical protein | HMPREF1065_03109 | Not Available | Negative | 3720804 - 3721343 | 19788.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

