Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | CL03T12C01 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1578661 bp
Thymine Count
1570423 bp
Guanine Count
1116965 bp
Cytosine Count
1121200 bp
Genome Length
5387249 bp
Protein-coding Genes
4417 genes
Non-Coding Genes
106 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | HMPREF1065_03032 | Not Available | Positive | 3603818 - 3604453 | 24228.8 |
| hypothetical protein | HMPREF1065_03033 | Not Available | Negative | 3604527 - 3605222 | 27026.8 |
| hypothetical protein | HMPREF1065_03034 | Not Available | Negative | 3605233 - 3609717 | 175241.0 |
| hypothetical protein | HMPREF1065_03035 | Not Available | Negative | 3609719 - 3613918 | 159894.0 |
| hypothetical protein | HMPREF1065_03036 | Not Available | Negative | 3613932 - 3614144 | 8157.98 |
| hypothetical protein | HMPREF1065_03037 | Not Available | Negative | 3614366 - 3615376 | 39668.2 |
| excisionase family dna binding domain-containing protein | HMPREF1065_03038 | Not Available | Negative | 3615469 - 3616581 | 43343.9 |
| hypothetical protein | HMPREF1065_03039 | Not Available | Positive | 3616933 - 3619500 | 97326.7 |
| rna polymerase sigma-70 factor, expansion family 1 | HMPREF1065_03040 | Not Available | Positive | 3619555 - 3620082 | 20717.8 |
| hypothetical protein | HMPREF1065_03041 | Not Available | Positive | 3620079 - 3621089 | 38831.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

