Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | CL03T12C01 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1578661 bp
Thymine Count
1570423 bp
Guanine Count
1116965 bp
Cytosine Count
1121200 bp
Genome Length
5387249 bp
Protein-coding Genes
4417 genes
Non-Coding Genes
106 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | HMPREF1065_03012 | Not Available | Positive | 3581183 - 3584116 | 114116.0 |
| hypothetical protein | HMPREF1065_03013 | Not Available | Positive | 3584130 - 3590255 | 232000.0 |
| hypothetical protein | HMPREF1065_03014 | Not Available | Positive | 3590257 - 3591336 | 41353.2 |
| dna (cytosine-5-)-methyltransferase | HMPREF1065_03015 | Not Available | Positive | 3591326 - 3592468 | 43794.9 |
| hypothetical protein | HMPREF1065_03016 | Not Available | Positive | 3592604 - 3592822 | 7762.47 |
| hypothetical protein | HMPREF1065_03017 | Not Available | Positive | 3592838 - 3592975 | 4879.74 |
| hypothetical protein | HMPREF1065_03018 | Not Available | Negative | 3593152 - 3594519 | 52319.8 |
| excisionase family dna binding domain-containing protein | HMPREF1065_03019 | Not Available | Negative | 3594531 - 3594899 | 14090.2 |
| hypothetical protein | HMPREF1065_03020 | Not Available | Positive | 3595028 - 3595147 | 4859.08 |
| hypothetical protein | HMPREF1065_03021 | Not Available | Positive | 3595182 - 3596099 | 34857.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

