Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | CL03T12C01 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1578661 bp
Thymine Count
1570423 bp
Guanine Count
1116965 bp
Cytosine Count
1121200 bp
Genome Length
5387249 bp
Protein-coding Genes
4417 genes
Non-Coding Genes
106 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| argininosuccinate synthase | HMPREF1065_02992 | Not Available | Negative | 3552570 - 3553778 | 45098.6 |
| hypothetical protein | HMPREF1065_02993 | Not Available | Negative | 3553886 - 3554443 | 20628.9 |
| arginine repressor | HMPREF1065_02994 | Not Available | Negative | 3554467 - 3554943 | 17501.2 |
| rhamnulokinase | HMPREF1065_02995 | Not Available | Positive | 3555251 - 3556729 | 54798.8 |
| l-rhamnose isomerase | HMPREF1065_02996 | Not Available | Positive | 3556772 - 3558025 | 47433.3 |
| hypothetical protein | HMPREF1065_02997 | Not Available | Positive | 3558119 - 3559138 | 35982.0 |
| rhamnulose-1-phosphate aldolase | HMPREF1065_02998 | Not Available | Positive | 3559200 - 3560033 | 31201.8 |
| hypothetical protein | HMPREF1065_02999 | Not Available | Positive | 3560392 - 3560889 | 18505.0 |
| hypothetical protein | HMPREF1065_03000 | Not Available | Negative | 3560990 - 3562504 | 55855.1 |
| hypothetical protein | HMPREF1065_03001 | Not Available | Negative | 3562672 - 3564291 | 60061.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

