Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | CL03T12C01 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1578661 bp
Thymine Count
1570423 bp
Guanine Count
1116965 bp
Cytosine Count
1121200 bp
Genome Length
5387249 bp
Protein-coding Genes
4417 genes
Non-Coding Genes
106 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | HMPREF1065_02965 | Not Available | Positive | 3509445 - 3512165 | 98642.2 |
| hypothetical protein | HMPREF1065_02966 | Not Available | Positive | 3512891 - 3513226 | 13362.7 |
| hypothetical protein | HMPREF1065_02967 | Not Available | Negative | 3513451 - 3514017 | 22004.7 |
| Trna-phe | Not Available | Not Available | Positive | 3514315 - 3514390 | Not Available |
| thiamine-monophosphate kinase | HMPREF1065_02968 | Not Available | Negative | 3514508 - 3515548 | 38227.8 |
| inosine guanosine and xanthosine phosphorylase | HMPREF1065_02969 | Not Available | Negative | 3515553 - 3516362 | 29995.4 |
| tetraacyldisaccharide 4'-kinase | HMPREF1065_02970 | Not Available | Negative | 3516325 - 3517425 | 42280.8 |
| signal peptide peptidase sppa, 67k type | HMPREF1065_02971 | Not Available | Negative | 3517433 - 3519214 | 65755.7 |
| hypothetical protein | HMPREF1065_02972 | Not Available | Positive | 3519349 - 3519954 | 23024.5 |
| hypothetical protein | HMPREF1065_02973 | Not Available | Positive | 3520027 - 3522867 | 105161.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

