Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | CL03T12C01 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1578661 bp
Thymine Count
1570423 bp
Guanine Count
1116965 bp
Cytosine Count
1121200 bp
Genome Length
5387249 bp
Protein-coding Genes
4417 genes
Non-Coding Genes
106 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | HMPREF1065_02895 | Not Available | Negative | 3428853 - 3429893 | 38929.1 |
| hypothetical protein | HMPREF1065_02896 | Not Available | Negative | 3429890 - 3431173 | 48830.5 |
| hypothetical protein | HMPREF1065_02897 | Not Available | Negative | 3431404 - 3432606 | 46647.6 |
| hypothetical protein | HMPREF1065_02898 | Not Available | Negative | 3432634 - 3433167 | 19807.2 |
| hypothetical protein | HMPREF1065_02899 | Not Available | Negative | 3433174 - 3434433 | 47861.8 |
| a disintegrin and metalloproteinase with thrombospondin motifs 20 | HMPREF1065_02900 | Not Available | Negative | 3434430 - 3434867 | 16641.8 |
| hypothetical protein | HMPREF1065_02901 | Not Available | Negative | 3435636 - 3436109 | 17323.7 |
| excisionase family dna binding domain-containing protein | HMPREF1065_02902 | Not Available | Negative | 3436140 - 3436382 | 9522.58 |
| hypothetical protein | HMPREF1065_02903 | Not Available | Negative | 3436615 - 3437028 | 16146.3 |
| hypothetical protein | HMPREF1065_02904 | Not Available | Negative | 3437025 - 3437645 | 23714.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

