Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | CL03T12C01 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1578661 bp
Thymine Count
1570423 bp
Guanine Count
1116965 bp
Cytosine Count
1121200 bp
Genome Length
5387249 bp
Protein-coding Genes
4417 genes
Non-Coding Genes
106 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | HMPREF1065_02835 | Not Available | Negative | 3375072 - 3376211 | 44098.9 |
| hypothetical protein | HMPREF1065_02836 | Not Available | Negative | 3376237 - 3377460 | 47283.1 |
| hypothetical protein | HMPREF1065_02837 | Not Available | Positive | 3377615 - 3377734 | 4422.32 |
| hypothetical protein | HMPREF1065_02838 | Not Available | Positive | 3377894 - 3378703 | 30705.9 |
| hypothetical protein | HMPREF1065_02839 | Not Available | Negative | 3378974 - 3379744 | 30631.3 |
| tigr02281 family clan aa aspartic protease | HMPREF1065_02840 | Not Available | Negative | 3379748 - 3381592 | 70063.9 |
| hypothetical protein | HMPREF1065_02841 | Not Available | Negative | 3381878 - 3383281 | 54522.5 |
| hypothetical protein | HMPREF1065_02842 | Not Available | Negative | 3383493 - 3384449 | 36413.0 |
| hypothetical protein | HMPREF1065_02843 | Not Available | Negative | 3384682 - 3385872 | 46592.8 |
| hypothetical protein | HMPREF1065_02844 | Not Available | Negative | 3385877 - 3386191 | 11936.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

