Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | CL03T12C01 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1578661 bp
Thymine Count
1570423 bp
Guanine Count
1116965 bp
Cytosine Count
1121200 bp
Genome Length
5387249 bp
Protein-coding Genes
4417 genes
Non-Coding Genes
106 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glutaminase a | HMPREF1065_02796 | Not Available | Negative | 3338205 - 3339119 | 34102.9 |
| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase | HMPREF1065_02797 | Not Available | Negative | 3339133 - 3340977 | 68261.7 |
| phosphoribosylaminoimidazole carboxylase, catalytic subunit | HMPREF1065_02798 | Not Available | Negative | 3341058 - 3341567 | 17729.0 |
| glycine cleavage system h protein | HMPREF1065_02799 | Not Available | Negative | 3341694 - 3342074 | 14165.5 |
| hypothetical protein | HMPREF1065_02800 | Not Available | Negative | 3342111 - 3342767 | 24880.0 |
| rna polymerase sigma-54 factor | HMPREF1065_02801 | Not Available | Negative | 3342772 - 3344241 | 56188.2 |
| hypothetical protein | HMPREF1065_02802 | Not Available | Positive | 3344370 - 3345743 | 51403.1 |
| glycyl-radical enzyme activating protein family | HMPREF1065_02803 | Not Available | Negative | 3345795 - 3346703 | 33607.1 |
| pyruvate formate-lyase | HMPREF1065_02804 | Not Available | Negative | 3346708 - 3349089 | 90327.5 |
| hypothetical protein | HMPREF1065_02805 | Not Available | Negative | 3349435 - 3351099 | 64257.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

