Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | CL03T12C01 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1578661 bp
Thymine Count
1570423 bp
Guanine Count
1116965 bp
Cytosine Count
1121200 bp
Genome Length
5387249 bp
Protein-coding Genes
4417 genes
Non-Coding Genes
106 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | HMPREF1065_02776 | Not Available | Negative | 3314416 - 3315153 | 27862.3 |
| udp-n-acetylmuramate-l-alanine ligase | HMPREF1065_02777 | Not Available | Negative | 3315150 - 3316526 | 51100.3 |
| undecaprenyldiphospho-muramoylpentapeptide beta-n-acetylglucosaminyltransferase | HMPREF1065_02778 | Not Available | Negative | 3316516 - 3317646 | 40607.7 |
| hypothetical protein | HMPREF1065_02779 | Not Available | Negative | 3317711 - 3319108 | 51097.8 |
| udp-n-acetylmuramoylalanine-d-glutamate ligase | HMPREF1065_02780 | Not Available | Negative | 3319132 - 3320466 | 49931.6 |
| phospho-n-acetylmuramoyl-pentapeptide- transferase | HMPREF1065_02781 | Not Available | Negative | 3320476 - 3321744 | 47043.8 |
| udp-n-acetylmuramoyl-l-alanyl-d-glutamate-2, 6-diaminopimelate ligase | HMPREF1065_02782 | Not Available | Negative | 3321757 - 3323211 | 53381.4 |
| hypothetical protein | HMPREF1065_02783 | Not Available | Negative | 3323230 - 3325410 | 80355.6 |
| hypothetical protein | HMPREF1065_02784 | Not Available | Negative | 3325415 - 3325789 | 14449.4 |
| ribosomal rna small subunit methyltransferase h | HMPREF1065_02785 | Not Available | Negative | 3325794 - 3326708 | 34443.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

