Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | CL03T12C01 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1578661 bp
Thymine Count
1570423 bp
Guanine Count
1116965 bp
Cytosine Count
1121200 bp
Genome Length
5387249 bp
Protein-coding Genes
4417 genes
Non-Coding Genes
106 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| susc/raga family tonb-linked outer membrane protein | HMPREF1065_02757 | Not Available | Negative | 3290762 - 3291598 | 29159.8 |
| hypothetical protein | HMPREF1065_02758 | Not Available | Negative | 3291717 - 3293933 | 84307.1 |
| hypothetical protein | HMPREF1065_02759 | Not Available | Negative | 3293975 - 3295825 | 70782.0 |
| hypothetical protein | HMPREF1065_02760 | Not Available | Positive | 3295923 - 3296072 | 5919.37 |
| hypothetical protein | HMPREF1065_02761 | Not Available | Positive | 3296074 - 3297669 | 62645.9 |
| hypothetical protein | HMPREF1065_02762 | Not Available | Negative | 3297782 - 3298060 | 10489.3 |
| hypothetical protein | HMPREF1065_02763 | Not Available | Negative | 3298579 - 3301062 | 89636.6 |
| hypothetical protein | HMPREF1065_02764 | Not Available | Negative | 3301135 - 3301620 | 19012.1 |
| hypothetical protein | HMPREF1065_02765 | Not Available | Positive | 3301972 - 3302115 | 5618.8 |
| hypothetical protein | HMPREF1065_02766 | Not Available | Negative | 3302325 - 3303680 | 49078.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

